Omics · study · 2026
REP-1 depletion causes altered mitochondrial energy metabolism in CHM disease, shifting from glycolysis to lipid oxidation
Listed in NCBI GEO
The persistent supply of glucose in the retina is essential for underpinning ATP production to meet the retinal cell’s energy requirements essential for the vision.
Description
Glucose transporters mainly mediate the glucose supply and diffusion thorough the retinal vasculature, choroid/RPE and photoreceptor cells. While the physiological mechanisms behind glucose supply have been well studied and described, how glucose supply dysfunction contributes to the phenotype of retinal disease is poorly understood.
Now we provide evidence that retinal energetic failure dependent by glucose supply defect explains large part of the phenotype of Choroideremia (CHM), an X-linked chorioretinal dystrophy caused by mutations in the Rab escort protein-1 (REP-1) gene. By interrogating the effect of REP-1 depletion in CHM, we found that alteration of glucose transporters GLUT-4 and GLUT-1 in the RPE/retina cells contribute to the CHM phenotype.
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REP-1 loss induces glucose-dependent bioenergetic deficiency, altering mitochondria morphology and function. By restoring both GLUTs expression and membrane translocation through pharmacological induction of phosphatidylinositol 3-Kinase pathway, we re-established the glucose uptake and its commitment towards RPE/retina both in vitro and in vivo. This study supports the notion that, in CHM, the absence of REP-1 causes an altered glucose uptake, which determines a deficit of energy compromising retinal cell homeostasis and function.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE299nnn/GSE299462 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299462 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1274478 ncbi.nlm.nih.gov/bioproject/PRJNA1274478 ↗
project · from NCBI GEO
- PubMed 41912478 pubmed.ncbi.nlm.nih.gov/41912478 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE299462 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |