Omics · study · 2026
2026_Warmuth_Doetsch_affinity-combined-CAR-T_cell-products_scRNAseq
Listed in NCBI GEO
Adoptive cell therapy with genetically engineered T cells expressing Chimeric Antigen Receptors (CARs) of high binding affinity has proven to be remarkably successful in refractory and relapsed B-cell malignancies.
Description
However, its broader clinical potential remains underexploited by the development of side effects due to intense CAR-T cell activation, as well as tumor relapse due to antigen-escape and limited persistence of CAR-T cells during sustained activation via high-affinity receptors.
These challenges highlight the critical need for strategies that maximize the safety and efficacy of CAR-T cell therapies. Recent studies suggest that optimal adjustments of the CAR binding affinity to its ligand offers promising opportunities. In this study, we characterized a broad range of CARs with varying affinities for the same target epitope down to physiological TCR-like binding interactions.
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While CAR affinity had minimal impact on in vitro functionality across a broad range, it strongly correlated with tumor control in vivo, which was significantly compromised for low-affinity binders. On the other hand, CARs with lower affinity induced only mild cytokine release syndrome (CRS) in humanized mouse models. Based on these findings, we implemented an affinity-combination approach to leverage the strong anti-tumor efficacy of high-affinity CARs alongside the enhanced safety profile of lower-affinity CARs.
We observed strong synergistic effects in combined products, like lower monocyte-induced cytokine production as compared to high-affinity CAR-T cells alone, while preserving efficacy. High-affinity CARs maintained strong functionality in mixtures with low-affinity CARs going along with strongly reduced signs of exhaustion when applied in combination. In long-term in vitro and in vivo settings, low-affinity CAR-T cells dominated over time proving more resilience to chronic antigen exposure, comparable to physiological T cell responses.
Overall, our findings demonstrate that affinity-combination might be an attractive strategy to generate more effective CAR-T cell products with an improved therapeutic index.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE322nnn/GSE322706 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE322706 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1431224 ncbi.nlm.nih.gov/bioproject/PRJNA1431224 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE322706 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |