Excel · study · 2026
How melanised lichens survive drying: transcriptomic insights into desiccation and UV-B cross-tolerance of Lobaria pulmonaria
Listed in NCBI GEO
This study investigates the molecular basis of desiccation tolerance in the lichen Lobaria pulmonaria and the effect of ultraviolet-B (UV-B) radiation.
Description
We employed RNA-Seq to profile gene expression in both mycobiont (L. pulmonaria) and photobiont (Symbiochloris reticulata) partners during desiccation (12h, 27h) and subsequent rehydration (1h). Comparative analysis of untreated (non-melanized) and UV-B pretreated (melanized) samples aims to identify the role of UV-B in the tolerance to desiccation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306843 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306843 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1312495 ncbi.nlm.nih.gov/bioproject/PRJNA1312495 ↗
project · from NCBI GEO
- PubMed 42731197 pubmed.ncbi.nlm.nih.gov/42731197 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306843 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |