Omics · study · 2026
Aging Alters the Distribution, Stability, and Transcriptional Signature of Engram Cells [snRNA-Seq]
Listed in NCBI GEO
Memories are stored in discrete neuronal ensembles, orengrams,within the hippocampusand other memory-related brain regions.
Description
Aging reducesthe ability to maintain or retrieve such memories, but how it affectsengram formation,stability and the molecularchangesthat enable retrieval remainunknown. In this study, we used the TRAP2 mouse model to permanently tag neurons activated within specifictime windows.
By combining this with a nuclear envelope-labeling reporter, we enabled automated quantification throughiDISCO and isolatedreactivated cells using fluorescence-activated nuclear sorting (FANS).Advanced analytical methods allowed us to examine the size, distribution, and stability of engrams across 378 brain regions,and identifyingtranscriptional signatures linked to memory encoding and recall inbothyoung and aged mice.
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Our findings reveal noveldynamics in engram activity, highlight previously unidentified brain regions involved in fear memory, and uncover key age-relateddifferences in engram activation that contribute tocognitive decline.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE289nnn/GSE289654 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289654 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1223897 ncbi.nlm.nih.gov/bioproject/PRJNA1223897 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Single-cell RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE289654 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |