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Table · dataset · 2026

<p>List of differentially expressed genes (DEGs).</p>

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<div><p>The transcriptional control of skeletal muscle differentiation requires the coordinated activity of lineage-defining transcription factors, signal-responsive regulators, chromatin modifiers, and ATP-dependent chromatin remodeling enzymes.

Description

Here, we identify TCEAL7, a member of the X-linked, poorly characterized TCEAL family of proteins, as a direct downstream target of BRG1-containing mammalian SWI/SNF (mSWI/SNF) complexes and calcineurin signaling during myoblast differentiation.

Analyses of previously published datasets showed that pharmacological inhibition of mSWI/SNF bromodomains or knockdown of the BRG1 ATPase, but not knockdown of the homologue BRM ATPase, significantly reduced <i>Tceal7</i> expression in differentiating C2C12 myoblasts. We demonstrate that BRG1 occupancy at the <i>Tceal7</i> promoter increased during differentiation, paralleling the induction of <i>Tceal7</i> expression and nuclear accumulation of TCEAL7 protein.

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BRG1 functions in part by integrating calcium-dependent cues via the phosphatase calcineurin (Cn); we also determined that Cn knockdown or pharmacological inhibition of Cn suppressed <i>Tceal7</i> expression and impaired myoblast differentiation. The data suggest that both BRG1-driven chromatin remodeling and Cn signaling converge on <i>Tceal7</i> regulation. Functionally, <i>Tceal7</i> knockdown altered cell proliferation and disrupted myoblast differentiation, at least in part due to reduced expression of <i>Myogenin</i>, which encodes a transcription factor that is an essential differentiation determinant.

RNA-seq analysis revealed broad dysregulation of myogenic, metabolic, and cell-cycle gene programs in <i>Tceal7</i>-deficient cells, including changes in cyclin-dependent kinase-regulated pathways consistent with prior reports linking TCEAL7 to cell-cycle control. Together, these findings identify TCEAL7 as a necessary component of the myogenic regulatory network whose expression is controlled by BRG1-dependent chromatin remodeling and Cn activity.</p></div>

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Inferred from text
RNA sequencing 65%
Provenance · 1 source records, 22 field assertions
SourceKeyLast seenRaw
figshareoai:figshare.com:article/3386637611 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[disease].local:disease:cancermapping · figshare comvocabulary-mapper@1.0.0keywords['Cancer']
concepts[field].anzsrc:group:3101mapping · figshare comvocabulary-mapper@1.0.0keywords['Cell Biology']
concepts[field].anzsrc:group:3105mapping · figshare comvocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3204mapping · figshare comvocabulary-mapper@1.0.0keywords['Immunology']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
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concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
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concepts[field].local:field:psychology-behavioralmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[modality].local:modality:rna-seqenrichment · figshare comkeyword-concept-rules@1.0.0title+description (65%)
descriptionsource · figshare comconnector:figshare_com@1.0.0/metadata/dc/description
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