Omics · study · 2026
RNA-seq profiling of mouse small intestine treated with intravenous immunoglobulin (IVIg) after total abdominal irradiation
Listed in NCBI GEO
Radiation-induced enteritis (RIE) is a common and severe adverse effect of radiotherapy for abdominal and pelvic tumors, with limited effective treatments.
Description
We previously demonstrated that intravenous immunoglobulin (IVIg) alleviates radiation toxicity, but its mechanism of action on intestinal stem cell (ISC) regeneration remains unclear. Here, we performed RNA-seq on the small intestine of mice with radiation-induced enteritis to investigate the transcriptomic changes induced by IVIg treatment.
Total abdominal irradiation (TAI, 12 Gy) was performed on C57BL/6J mice, followed by intravenous administration of IVIg (500 mg/kg) within 1 h after irradiation. Jejunal tissues were collected on Day 3 post-irradiation for RNA-seq analysis. Our results show that IVIg treatment significantly altered the expression of genes related to cell proliferation, inflammation, oxidative stress, and the Wnt/β-catenin signaling pathway, which is critical for ISC maintenance and regeneration.
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These data provide a molecular basis for the radioprotective effect of IVIg in mitigating RIE, supporting its potential as a therapeutic candidate for this condition.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329124 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329124 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1440482 ncbi.nlm.nih.gov/bioproject/PRJNA1440482 ↗
project · from NCBI GEO
- PubMed 42242214 pubmed.ncbi.nlm.nih.gov/42242214 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329124 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |