Omics · study · 2026
Two MADS-box transcription factors mediate epigenetic control of tomato fruit ripening [RNA-seq]
Listed in NCBI GEO
Using RNA-Seq to analyse the gene expression pattern in WT tomato AC and dml2-3, rin/tdr4-1 mutant at 25 dpa (days post anthesis) and in WT tomato AC and dml2-3, rin/tdr4-1,rin, tdr4, nor mutant at 34 dpa (Breaker stage)
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE210nnn/GSE210589 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210589 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA866380 ncbi.nlm.nih.gov/bioproject/PRJNA866380 ↗
project · from NCBI GEO
- PubMed 40203043 pubmed.ncbi.nlm.nih.gov/40203043 ↗
publication · from NCBI GEO
- PubMed 42386734 pubmed.ncbi.nlm.nih.gov/42386734 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE210589 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |