Omics · study · 2026
Forced Notch2 signaling instructs TLR and BCR responsiveness in B cells [RNA-Seq]
Listed in NCBI GEO
Marginal zone (MZ) B cells optimize protection against blood-borne bacteria by rapidly producing plasma cells in response to Toll-like Receptor (TLR) ligands.
Description
Here, we demonstrate that forced Notch2 instructs this responsiveness for Notch2-independent follicular B cells. Upon stimulation with either TLR4 ligand LPS or B cell receptor crosslinking via anti-IgM, access to Notch2 ligands promoted early transcriptional changes to numerous activation programs.
These changes include augmenting TLR response programs, early and late mitotic pathways, and key cell growth and protein secretion pathways critical for plasma cell differentiation. We conclude that t uniquely robust hyper-responsiveness can be ascribed to any B cell with access to Notch2 ligands.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE335nnn/GSE335245 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335245 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1477801 ncbi.nlm.nih.gov/bioproject/PRJNA1477801 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE335245 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |