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Excel · study · 2026

HHO5 orchestrates feedback regulation between organic and inorganic N-dose dependent signaling in Arabidopsis; DoubleTARGET

Listed in NCBI GEO

A major goal in agriculture is to engineer crops that can maintain yield with less nitrogen (N) fertilizer input.

Description

Important regulators of plant N-responses include the HRS1 HOMOLOG (HHO) transcription factors (TFs), yet their redundant repressive mode of action has hindered functional analyses. Here, we highlight HHO5 as a unique HHO TF based on its phylogenetic position, phloem specific expression, and its dual role in orchestrating responses to both inorganic and organic N-dose signals.

Moreover, single hho5 T-DNA mutants show reduced N-dose dependent growth, and decreased seed N content, indicating phenotypic defects in systemic N-dose responses. Our meta-analysis revealed that HHO5 expression is repressed by nitrate but induced by organic N treatments. To uncover its mode of action, we derived a validated HHO5 gene regulatory network path in which the direct and indirect targets of HHO5 encompass ~12% of all N-dose response genes in planta.

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We show that HHO5 acts as a direct repressor of genes functionally enriched for nitrate responses. By contrast, HHO5 indirectly induces expression of organic N-response genes functionally enriched in nutrient level versus defense response genes. We propose that WRKY21 may act as a partner TF that aids HHO5 in the induction of defense related gene expression using the new DoubleTARGET TF co-perturbation assay.

Physiological experiments of hho5 mutants support the hypothesis that HHO5 plays a dual regulatory in balancing inorganic vs organic N-dose signals. Overall, these results support a model of energy conservation, whereby HHO5 pivots feedback repression of inorganic nitrate sensing/transport under organic N satiety.

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Life Sciences
Provenance · 1 source records, 7 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32977315 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[organism].NCBITaxon:3702source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title