Omics · study · 2026
GigaMUGA mouse genotyping array data for Modifiers of Placental Function That Mediate Survival of Sfmbt2 Deficient Embryos
Listed in NCBI GEO
To search for potential modifiers of placental function that mediate the survival of Sfmbt2 deficient embryos, we analyzed 44 samples validated to be lacking paternal Sfmbt2 but still born at a low survival rate due to the presence of maternal CD1 genetic content.
Description
The genotyping was performed using Giga Mouse Universal Genotyping Array (GigaMUGA) which provides the status of >143000 SNPs. The GigaMUGA SNP array was performed on DNA extracted from brains of survivors of crosses of (CD1 X B6) F1 females with C57BLB6gt (Sfmbt2 gene trap) males.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE264nnn/GSE264588 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE264588 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1103199 ncbi.nlm.nih.gov/bioproject/PRJNA1103199 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome variation profiling by array · Genome variation profiling by SNP array · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE264588 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-variation-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:genome-variation-profiling-by-snp-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |