Omics · study · 2026
RIF1 regulates post-replicative H3K9me3 restoration at multiple cell cycle stages
Listed in NCBI GEO
DNA replication causes the dilution of parental histones with their specific post-translational modification.
Description
The kinetics of restoration of these marks on the newly incorporated histones dictates how quickly genomic domains re-acquire their epigenetic identity after replication. H3K9me3 is reconstituted extremely slowly: only in the following S-phase, just prior to replication, the pre-replication levels are restored.
The molecular mechanisms behind this slow reconstitution are unknown. We show here that RIF1 reassociation with heterochromatin during mitotic exit is required to set up a chromatin permissive for histone methyltransferases to resume H3K9me3 deposition. RIF1 facilitates the recruitment of SUV39H1, HP1a and HP1b and is required for the increased tri-methylation of H3K9 that takes place during G1.
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RIF1 is also indispensable for recruiting PP1a to heterochromatin, and the interaction between RIF1 and PP1a is essential for the maintenance of H3K9me3 levels. In addition, RIF1-PP1 complex temporally restrains the activity of Aurora kinases at heterochromatin, ensuring that phosphorylation of H3S10 does not precede replication. We suggest that this is a further mechanism to increase the window of time available pre-replication for SUV39H1/2 to complete the restoration of H3K9me3 levels.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE299nnn/GSE299608 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299608 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1275673 ncbi.nlm.nih.gov/bioproject/PRJNA1275673 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE299608 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |