Imaging · study · 2026
The spatial transcriptomics of the mouse brain 3 days after tMCAO
Listed in NCBI GEO
This study employed spatial transcriptomics to profile the expression and spatial distribution in mouse brains 3 days after transient middle cerebral artery occlusion (tMCAO).
Description
By capturing genome‑wide transcriptional data with spatial coordinates, we aimed to map the regional expression patterns of these genes across the ischemic core, penumbra, and remote areas, and to delineate their co‑localization relationships with distinct immune and glial cell populations.
This spatially resolved approach will provide insights into the topographic organization of serotonergic signaling and neuroimmune interactions during the acute phase of ischemic stroke.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE337nnn/GSE337578 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337578 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1490444 ncbi.nlm.nih.gov/bioproject/PRJNA1490444 ↗
project · from NCBI GEO
Topics
- Stated by source
- Mus musculus · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE337578 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |