Omics · study · 2026
Transcriptome study of Talaromyces verruculosus TS63-9 for pectin-degrading CAZymes
Listed in NCBI GEO
Pectins are a primary structural component of plant cell walls.
Description
In a previous study, we isolated a fungal strain, Talaromyces verruculosus TS63-9, which exhibited a high pectinase activity (142.43 U/mL) in a large-scale screening and sequenced its genome. Here, we further sequenced its transcriptome to study the transcriptional changes of TS63-9 in response to pectin treatment.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE331nnn/GSE331034 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE331034 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1214872 ncbi.nlm.nih.gov/bioproject/PRJNA1214872 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE331034 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |