Omics · study · 2026
Sulfotransferase Signaling Sustains Fibroblast Identity and Antagonizes Therapeutic Cardiac Reprogramming
Listed in NCBI GEO
Maintenance of cell identity requires regulatory mechanisms that preserve lineage-specific gene expression programs and chromatin states.
Description
To investigate the role of JUNB in fibroblast fate stability during cardiac reprogramming, we performed CUTandRUN profiling of JUNB binding in mouse embryonic fibroblasts undergoing Mef2c, Gata4, and Tbx5 (MGT)-mediated cardiac reprogramming. JUNB occupancy was examined under control conditions and following perturbation of the fibroblast identity barrier gene Chst7.
These datasets were generated to define genome-wide JUNB chromatin binding patterns and to investigate how extracellular signaling pathways influence JUNB-mediated regulation of chromatin accessibility and transcriptional programs during cell fate conversion. The resulting data provide a resource for studying transcription factor occupancy, chromatin regulation, and mechanisms of cell identity maintenance during direct cardiac reprogramming.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE334nnn/GSE334192 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334192 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1474302 ncbi.nlm.nih.gov/bioproject/PRJNA1474302 ↗
project · from NCBI GEO
- PubMed 42469251 pubmed.ncbi.nlm.nih.gov/42469251 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Heart 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE334192 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |