Data · dataset · 2026
Reproducibility metadata and experimental artifacts from a prostate cancer binary segmentation study using the public DIAGSET database
Listed in REDU - Unicamp Institutional Research Data Repository
This dataset contains reproducibility metadata, provenance records, configuration files, manifests, intermediate artifacts, and experimental results from a computational study on automated prostate cancer identification and binary segmentation in histopathological slide images.
Description
The study used the public DIAGSET database as the input image source; the original DIAGSET images are not redistributed in this deposit. The deposited materials document how the research data were processed throughout the workflow, including artifact identification, patch and binary-mask extraction, quality control, graph-based cleaning, patient-level partitioning into training, validation, and test sets, color-normalization strategies, smart sampling of training patches, learning-rate selection, supervised segmentation model training, ensemble optimization, and final inference/evaluation.
The collection includes CSV manifests, SQLite provenance and execution databases, GeoJSON-related artifact metadata, patient-level split artifacts, sampling records, model-training metadata, ensemble configuration files, and quantitative evaluation outputs. Its purpose is to support verification, traceability, and reproducibility of the computational methodology used to study prostate cancer segmentation in histopathological images.
Links
Where it is published
- Dataverse dataset page redu.unicamp.br/dataset.xhtml?persistentId=doi%3A10.25824%2Fredu%2FEDPCF2 ↗
landing page · from redu unicamp br
- DOI doi.org/10.25824/redu/edpcf2 ↗
DOI / persistent id · from redu unicamp br
Catalogue records · 1
- Dataverse API redu.unicamp.br/api/datasets/:persistentId/?persistentId=doi%3A10.25824%2Fredu… ↗
metadata API · from redu unicamp br
Topics
- Stated by source
- Computer and Information Science · Engineering · Mathematical Sciences · Medicine, Health and Life Sciences
- From keywords
- Artificial intelligence · Cancer · Computer Science & AI · Engineering · Life Sciences · Mathematics & Statistics · Medicine & Health
- Inferred from text
- Image 75%
Provenance · 1 source records, 18 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| REDU - Unicamp Institutional Research Data Repository | doi:10.25824/redu/EDPCF2 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[disease].local:disease:cancer | mapping · redu unicamp br | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:group:4602 | mapping · redu unicamp br | vocabulary-mapper@1.0.0 | keywords['Artificial Intelligence'] |
| concepts[field].dataverse_subject:computer-and-information-science | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].dataverse_subject:engineering | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].dataverse_subject:mathematical-sciences | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].local:field:computer-science-ai | mapping · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].local:field:engineering | mapping · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].local:field:mathematics-statistics | mapping · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /subjects |
| concepts[modality].local:modality:image | enrichment · redu unicamp br | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | |
| description | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /description |
| publication_date | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | |
| title | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | /name |
| updated_date | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 | |
| version_label | source · redu unicamp br | connector:redu_unicamp_br@1.0.0 |