Omics · study · 2026
TAF3 Promotes Tumor Progression of Hepatocellular Carcinoma via SREBP2-mediated Cholesterol Synthesis Pathway Activation
Listed in NCBI GEO
Our prior work identified TATA-binding protein-associated factor 3 (TAF3) as a key prognostic marker in hepatocellular carcinoma (HCC).
Description
Here, we investigate TAF3’s functional role and mechanistic basis in HCC progression. Loss- and gain-of-function assays demonstrated that TAF3 significantly altered proliferation, invasion, and migration in HepG2 and MHCC97H cell lines.
Clinical analysis of 30 HCC specimens revealed that elevated TAF3 expression correlated strongly with larger tumor size, increased tumor number, microvascular invasion, advanced stage, poor differentiation, and worse prognosis. Mechanistically, comprehensive ChIP-seq and luciferase reporter assays identified sterol regulatory element-binding protein 2 (SREBP2) as a direct transcriptional target of TAF3. TAF3 bound the SREBP2 promoter, upregulating its expression and activating cholesterol biosynthesis.
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TAF3’s oncogenic effects were cholesterol-dependent, as cholesterol supplementation rescued malignant phenotypes in TAF3-deficient cells. Our findings establish that TAF3 drives HCC progression via SREBP2-mediated cholesterol biosynthesis, providing insights into the metabolic basis of HCC aggressiveness. These results elucidate a transcriptional-metabolic axis in HCC and suggest therapeutic potential in TAF3-overexpressing tumors with vascular invasion.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306284 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306284 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1310413 ncbi.nlm.nih.gov/bioproject/PRJNA1310413 ↗
project · from NCBI GEO
- PubMed 42684530 pubmed.ncbi.nlm.nih.gov/42684530 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306284 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |