DataSuds2026 · dataset · unknown
Savanache backendThis dataverse contains the source code for Savanache back-end publication
DataSuds2026 · dataset · unknown
Savanache mainThis is the main repo code for Savanache, v1.0.1
DataSuds2026 · dataset · unknown
Savanache APIThis dataverse contains the current code for Savanache API 0.7.0, corresponding with the 1.0.1 main Savanache version
DataSuds2026 · dataset · unknown
Savanache front-endThis dataverse contains the Savanache front-end code
DataSuds2026 · dataset · unknown
Trapping data for terrestrial small mammals in the periphery of Bamako city, Mali (2021-2024)The project ‘Petits mammifères de Bamako’ conducted by the Institute of Rural Economy (IER) and IRD between 2021 and 2024, aimed to characterize the communities of commensal small mammals in the city of Bamako (Mali, West Africa) and its surrounding areas. Several trapping campaigns were first carried out across different quarters of Bamako and then extended to peripheral districts located in neig
DataSuds2026 · dataset · unknown
Replication data for: “Applications of joint species distribution models in community ecology: a systematic literature review”Joint species distribution models (JSDMs) have emerged over the past decade as a vital biogeographic tool for incorporating multispecies co-occurrence data into species distribution modeling. However, a comprehensive synthesis of their practical applications has been lacking. This dataset contains the literature survey matrices and analytical criteria used to systematically review JSDM application
DataSuds2026 · dataset · unknown
Data and images supporting the revision of Chaetocarpus (Peraceae) in the Guianas and the description of Chaetocarpus morigerus, sp. novThis dataset is associated with the article published in Adansonia, “Revision of the genus Chaetocarpus (Peraceae) in the Guianas and description of a new species, C. morigerus”: [URL] It contains two types of data: 1. Photographs and scanning electron microscopy (SEM) images The dataset includes photographs and SEM images of the three Chaetocarpus (Peraceae) species occurring in the Guianas: Chae
DataSuds2026 · dataset · unknown
Thirty-two years of inventory data (1986-2018) from the GUYADIV forest plot network in French Guiana, covering 100 ha and 90,000 treesThe GUYADIV dataset includes inventory data for more than 100 hectares of terra firme tropical forest distributed across French Guiana. It contains information on more than 90,000 censused trees, which were mapped, measured for trunk diameter, and identified to species level in 98% of cases. These trees belong to 1,393 species, 370 genera and 84 families. It comprises four tables, provided either
DataSuds2026 · dataset · unknown
GUYADIV forest plot network: geospatial dataset of plot locations and spatial extentsThe GUYADIV geo-dataset provides the geographical location and spatial extent of all plots in the GUYADIV forest plot network, covering approximately 100 hectares of forest inventories distributed across French Guiana. The dataset is provided in GeoPackage (.gpkg) format using the WGS 84 geographic coordinate system (EPSG:4326), and is compatible with standard geographic information system (GIS) s
DataSuds2026 · dataset · unknown
Replication data for : DNA-based monitoring of bushmeat trade dynamics and hotspots across western and central AfricaWe build on a four-gene mitochondrial DNA-typing approach to develop an unprecedented reference database framework for effectively tracing the bushmeat trade in tropical Africa. The dataset includes 8,673 mitochondrial sequences generated from 2,516 bushmeat samples collected over a 13-year period (2008–2020) across 10 tropical African countries and from two airport seizures in Europe. The dataset
DataSuds2026 · dataset · unknown
Serological signals of past dengue exposure in general practice in southern mainland FranceThe incidence of autochthonous arboviral infections in mainland France, particularly in the southern region of Occitanie, is increasing. Despite mandatory reporting, non-specific symptoms and asymptomatic cases likely lead to case underestimation. This study aimed to assess dengue seroprevalence for the first time in the general population consulting in routine general practice in southern mainlan
DataSuds2026 · dataset · unknown
Dynamic spatial conservation boundaries and internal zoning of Madagascar from 2000 to 2025This dataset extends the World Database on Protected Areas (WDPA) with time-bounded states documenting boundary modifications, status reclassifications, governance changes, temporary protections, and internal zoning. It covers 123 terrestrial protected areas in Madagascar from 2000 to 2025. Data were compiled by integrating historical archive snapshots, national protected-area system datasets, leg
DataSuds2026 · dataset · unknown
Historical database of urban flooding in Ho Chi Minh City, Vietnam (2002–2026)This dataset compiles 425 geolocated observations of urban flooding in Ho Chi Minh City, recorded between 2002 and 2026 from 53 sources (mainly Vietnamese newspapers, along with a few technical reports). Each observation documents the date, location (name, type, ward/commune, and the current administrative unit following the 2025 administrative reform), water height (minimum/maximum in cm and dept
DataSuds2026 · dataset · unknown
Stakeholder participation data from a cross-scale action-research intervention on small-scale fisheries in MadagascarThis dataset contains information on the participation of different fishery stakeholder groups involved in an action-research intervention in Madagascar’s mud crab fisheries. The intervention covered four main regions, Diana, Boeny, Menabe, and Atsimo Andrefana, as well as the central fisheries administration. Stakeholder participation was assessed between 2020 and 2024 through an iterative partic
DataSuds2026 · dataset · unknown
MIR spectral data for soil organic and inorganic prediction - EJP Soil SICSOCDYN project179 soil samples were collected from France, Tunisia, Hungary, Italy, Germany and Canada. All the information was given in Hazera et al. 2026 (https://doi.org/10.57745/AL3NVT) and in Hazera et al. 2026 (https://doi.org/10.5194/bg-23-1881-2026). Spectral acquisitions The MIR reflectance spectra were measured using a lab spectrophotometer Bruker Invenio S (Bruker Optics, Ettlingen, Germany). The spe
DataSuds2026 · dataset · unknown
Simulated data for GranPa v1 paperThis dataset contains all the simulated data (insertion, deletion, original sequences) and graphs for the GranPa v1 paper
DataSuds2026 · dataset · unknown
rice dataThis dataset cointains all the output from GraNPA original paper for rice
DataSuds2026 · dataset · unknown
HYDROTHIEM observatory (eastern tropical coast of New Caledonia, South West Pacific): water resource observation data, 2018-2023HydroThiem observatory, located in the humid eastern coast of New Caledonia is devoted the study of impact of invasive ungulate species and bushfires on the amount of water resource, erosion and water quality in a catchment used for drinking water. Data from this observatory can be used as a comparison with other catchments submitted to different or similar disturbances Please note that the datase
DataSuds2026 · dataset · unknown
Barriers and solutions to adopting healthy diets amongst women and children in Addis Ababa, Ethiopia: a Photovoice studyThe data from this study presents the lived experiences of women of reproductive age living in urban Ethiopia and the challenges they face in eating healthily for themselves and their children, as well as the solutions they propose. This study fits under the Problem domain of the TAMMIE project, which aims to understand the drivers of the double burden of malnutrition, specifically focusing on poo
DataSuds2026 · dataset · unknown
Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium speciesData and script supporting the paper: "The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species." Avian malaria parasites form a highly prevalent and genetically diverse group within the haemosporidians, yet they have long been overlooked relative to their human- and rodent-infecting counterparts. Among these, parasites of the gen
DataSuds2026 · dataset · unknown
cattle dataCattle Pangenome variation graph data used in the GranPA paper
DataSuds2026 · dataset · unknown
GranPa source code, v1This code is the version used in the GranPa paper
DataSuds2026 · dataset · unknown
Supplementary command lines for the GraNPA paperThis file contains all the commands used for generate data and results in the GranPA paper
DataSuds2026 · dataset · unknown
Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencingThis repository contains all the files needed to reproduce the results of the article "ViroSeek: a viral detection pipeline for second-generation sequencing", including the files needed to run the ViroSeek pipeline. ViroSeek is a simplified bioinformatics pipeline for the taxonomic analysis of second-generation sequencing data. It contains: Main pipeline scripts (bash or nextflow) for automated ex
DataSuds2026 · dataset · unknown
Données hydrologiques aux sites de Thysse Kaymor, Sénégal : période 1983-1992 (base SIEREM)Séries temporelles de débits moyens journaliers (daily discharges) et debits instantanés (instantaneaous discharges) de 6 stations hydrométriques dans la région de Thysse Kaymor, Sine Saloum bassin versant de la Gambie au Sénégal. Ajout au dépôt des débits instantanés -instantaneaous discharges. Le recours aux débits instantanés est privilégié pour le suivi hydrologique de ce bassin versant experi