← Search

Data · dataset · 2014

Sugarbeet Unigenes Assigned to KEGG Pathways

Listed in DataCite

Fileset contains KEGG pathway maps to which sugarbeet transcript-based unigenes were assigned.

Description

Unigenes were assembled from RNA-seq of sugarbeet leaf and root tissues. Full description of research is available in manuscript, "Generation and characterization of a sugarbeet ( Beta vulgaris L.) transcriptome and transcript-based SSR markers," by KK Fugate, D Fajardo, B Schlautman, JP Ferrareze, MD Bolton, LG Campbell, E Wiesman, and J. Zalapa, The Plant Genome .

Unigene sequences can be found in the fileset, "Sugarbeet transcriptome unigenes" (figshare.com/articles/Sugarbeet_transcriptome_unigenes/843615). KEGG pathway maps were developed by Kanehisa Laboratories and are used with permission. Information regarding KEGG pathways can be found in the following references: Kanehisa, M., Goto, S., Sato, Y., Kawashima, M., Furumichi, M., and Tanabe, M.; Data, information, knowledge and principle: back to metabolism in KEGG.

Read the rest (1 more)

Nucleic Acids Res. 42, D199–D205 (2014); Kanehisa, M. and Goto, S.; KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28, 27-30 (2000). For information regarding the use of maps, see file, KEGG, readme.txt.

Links

Topics

Stated by source
Biological sciences
From keywords
Plant biology
Inferred from text
RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.93072415 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
byte_sizesource · DataCiteconnector:datacite@1.0.0
concepts[field].fos:biological-sciencessource · DataCiteconnector:datacite@1.0.0
concepts[modality].local:modality:rna-seqenrichment · DataCitekeyword-concept-rules@1.0.0title+description (65%)
created_datesource · DataCiteconnector:datacite@1.0.0
descriptionsource · DataCiteconnector:datacite@1.0.0/data/attributes/descriptions
licensesource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
publication_datesource · DataCiteconnector:datacite@1.0.0/data/attributes/dates
titlesource · DataCiteconnector:datacite@1.0.0/data/attributes/titles/0/title
updated_datesource · DataCiteconnector:datacite@1.0.0