Omics · study · 2026
Chronic manganese exposure with and without latency period in hiPSC-derived cortical cultures
Listed in NCBI GEO
Behavioral deficits encompassing motor, cognitive, and psychological domains can emerge after removal of manganese (Mn) exposures in humans and other mammals.
Description
While epidemiological studies provide substantial evidence supporting latent persistent Mn neurotoxicity, reproducing such effects in cellular and non-mammalian model systems has slowed mechanistic understanding. Here we report in human induced pluripotent stem cell (hiPSC)-derived cortical cultures that chronic Mn exposure elicits clear latent and persistent neurotoxic effects in gene expression and functional outcomes.
To identify persistent and latent effects, and investigate underlying mechanisms, single-cell RNA sequencing was employed in the hiPSC model to provide a comprehensive cell-type specific comparison of transcriptomic changes immediately at the termination versus after a prolonged cessation of chronic Mn exposures. Transcriptomic alterations revealed clear latency of effects after Mn cessation that were not detected immediately following the 40-day exposure.
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Identified alterations support the linkage between the latent and persistent effects of chronic Mn exposure and a broad range of neurodegenerative pathogenesis and provide insight into the cellular pathways involved.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE325nnn/GSE325791 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325791 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1441630 ncbi.nlm.nih.gov/bioproject/PRJNA1441630 ↗
project · from NCBI GEO
- PubMed 42033779 pubmed.ncbi.nlm.nih.gov/42033779 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE325791 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |