Omics · study · 2026
Role of microRNAs in flunarizine-mediated neuroprotection of motoneuron disease spinal muscular atrophy
Listed in NCBI GEO
Spinal muscular atrophy (SMA) is caused by mutations in the Survival Motor Neuron 1 (SMN1) gene, leading to reduced SMN protein levels and widespread disruption in RNA metabolism.
Description
Despite the availability of disease-modifying therapies, clinical outcomes remain variable. Dysregulation of small non-coding RNAs, including microRNAs, has been reported in SMA, but their contribution to the disease remains poorly understood.
We previously showed that flunarizine could improve the phenotype of an SMA mouse model. Here, the microRNA profile of flunarizine-treated SMA patient fibroblasts is determined by small-RNA sequencing, a subset of 30 microRNAs is validated by RT-qPCR and the effect of the differentially expressed microRNAs is analyzed using miR mimics and inhibitors in murine motor neuron-like NSC34 cells. The miR-128-3p, miR-149-5p, miR-191-5p, and miR-320a-3p are identified as novel SMA-dysregulated microRNAs.
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The transfection of the miR-128-3p inhibitor in NSC34 cells reduces the flunarizine-induced neurite outgrowth, a morphological hallmark of neurons. The homeodomain interacting protein kinase 2 (HIPK2) is identified as a miR-128-3p target among the differentially expressed genes by flunarizine. The transfection of miR-128-3p mimic reduces the Hipk2 mRNA levels whereas miR-128-3p inhibitor increases them.
Moreover, Hipk2 expression is regulated in a genotype- and sex-dependent manner by flunarizine at early and late stages of disease in an SMA mouse model. Flunarizine changes the microRNA profile in NSC34 cells and attenuates the dysregulation of microRNAs in the SMA mouse model. We propose that an early accumulation of microRNAs can contribute to molecular dysfunctions and may represent a key-initiating event in SMA pathogenesis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE319nnn/GSE319993 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319993 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1425949 ncbi.nlm.nih.gov/bioproject/PRJNA1425949 ↗
project · from NCBI GEO
- PubMed 42260294 pubmed.ncbi.nlm.nih.gov/42260294 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE319993 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |