Data · dataset · 2024
18S rRNA amplicon sequencing from the Ocean Sampling Day (OSD) campaign June 2018
Listed in GBIF
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans.
Description
It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites.
The OSD2018 event is a continuation of the successful OSD events of Micro B3 project (microb3.eu/osd.html).
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006611.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/da450c94-538b-4161-9ff2-65da5c2990e1 ↗
landing page · from gbif
- DOI doi.org/10.15468/hrtf4u ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006611 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/da450c94-538b-4161-9ff2-65da5c2990e1 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Ecology 71% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | da450c94-538b-4161-9ff2-65da5c2990e1 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:group:3103 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |