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Omics · study · 2026

Cardiomyocyte-specific TGFb1/2/3 deficiency impacts early heart maturation [snRNA-Seq].

Listed in NCBI GEO

Transforming growth factor β (TGFβ) is a secreted growth factor that, in early development, transforms fibroblasts into a differentiated state to synthesize ECM and matricellular proteins.

Description

The fibroblasts, in turn, impact cardiomyocyte maturation through cell-cell interactions, ECM-cellular interactions, and paracrine factors. We observed that the combined deletion of Tgfb1, Tgfb2, Tgfb3 genes (TGFβ ligands) from cardiomyocytes in the early developing heart results in cardiac dysfunction by 6 weeks of age with altered fibroblast activity and perturbed ECM content.

Effects were however apparent far earlier, with postnatal hearts being dysmorphic and cardiac fibroblasts having incorrect activity, producing inappropriate ECM with reduced stiffness. This indicating effects during early development, both embryonic and post-natal. In order to elucidate these early effects, we carried out single nucleus RNA sequencing analysis of cardiac nuclei isolated from experimental (lacking TGFβ1/2/3 in cardiac myocytes) and control (expressing TGFβ1/2/3 in cardiac myocytes) hearts harvested from P7 (day 7 post-birth) pups.

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Life Sciences
Inferred from text
Heart 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE30789914 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[anatomy].local:anatomy:heartenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title