Imaging · dataset · 2022
Occurrence of Eukaryotes in the size fraction 5-20 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by environmental High Content Fluorescence Microscopy (e-HCFM)
Listed in GBIF
The Tara Oceans project sampled contrasting ecosystems of the world oceans during a three-year expedition (2009-2013), collecting environmental data and plankton, from viruses to metazoans, on board the 36-metre Tara Schooner.
Description
It surveyed 210 ecosystems in 20 biogeographic provinces, collecting over 35,000 samples of seawater and plankton. Samples were later analysed using modern sequencing and state-of-the-art imaging technologies.
Links
Get the data
- Darwin Core Archive ipt.vliz.be/eurobis/archive.do?r=tara_ehcfm_h5 ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/3779dd9c-93ef-4fcb-ba6c-31e4fd817222 ↗
landing page · from gbif
- DOI doi.org/10.15468/264k6u ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ecotaxa.obs-vlfr.fr/api/collections/by_title?q=E.G.%3A+Occurrence+of+Eukaryotes+in… ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/3779dd9c-93ef-4fcb-ba6c-31e4fd817222 ↗
metadata API · from gbif
Topics
- From keywords
- Imaging · Life Sciences
- Inferred from text
- Ecology 70% · Microscopy 75% · Sequencing 75%
Provenance · 1 source records, 14 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | 3779dd9c-93ef-4fcb-ba6c-31e4fd817222 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:group:3103 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:imaging | mapping · gbif | vocabulary-mapper@1.0.0 | keywords['Imaging'] |
| concepts[modality].local:modality:microscopy | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| spatial | source · gbif | connector:gbif@1.0.0 | |
| temporal | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |