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Omics · study · 2026

Integrated Analysis of lncRNA-miRNA-mRNA Interaction Network in Myocardial Ischemia-Reperfusion Injury During Cardiopulmonary Bypass Surgery in Mouse [RNA-seq]

Listed in NCBI GEO

Description

The Long non-coding RNA (LncRNA) miRNA competing endogenous RNA (ceRNA) regulatory network play a pivotal role in the intricate orchestration of cardiovascular diseases, governing their onset and progression.In order to delve deeper into the ceRNA mechanism underlying myocardial ischemia-reperfusion injury (MIRI), we conducted a randomized division of six 8-week-old male C57BL/6J mice into two groups: the Sham group and the ischemia/reperfusion (I/R) group.

Subsequently, we employed the Langendorff isolated heart perfusion system to carry out the experiment. Following the completion of the experiment, cardiac samples were meticulously collected and evenly partitioned into two segments: one for lncRNA library sequencing and the other for small RNA library sequencing. By leveraging the sequencing data, we meticulously scrutinized the disparities in lncRNA, miRNA, and mRNA expression profiles between the two sample sets, thereby unearthing the lncRNA-miRNA-mRNA ceRNA regulatory network that assumes a pivotal regulatory role in MIRI.

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From keywords
Life Sciences
Inferred from text
Heart 75% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE24070112 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[anatomy].local:anatomy:heartenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title