Omics · study · 2026
An Interferon-γ-Driven Myeloid Inflammatory Signature defines Glucocorticoid-Resistance of Immune Checkpoint Inhibitor-Associated Myocarditis
Listed in NCBI GEO
Immune checkpoint inhibitor-associated myocarditis (ICI-myocarditis) is a rare but severe immune-related adverse event characterized by myocardial inflammation and injury.
Description
Although high-dose glucocorticoids represent first-line therapy, a subset of patients exhibits persistent myocardial injury despite treatment. In this study, we analyzed a cohort of 74 patients with ICI-myocarditis and classified patients based on longitudinal high-sensitivity cardiac troponin T (hs-cTnT) trajectories following glucocorticoid initiation into glucocorticoid-sensitive (GC-S) and glucocorticoid-refractory (GC-R) groups.
Clinical outcomes, including major adverse cardiac events (MACE), were assessed. To investigate underlying biological differences, single-nucleus RNA sequencing (snRNA-seq) was performed on endomyocardial biopsy samples from GC-S (n=2) and GC-R (n=4) patients. The dataset provides high-resolution transcriptional profiles of myocardial cell populations, enabling analysis of cellular composition and inflammatory signaling pathways associated with differential treatment response.
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This resource supports investigation of immune cell heterogeneity and transcriptional programs in ICI-myocarditis, with a focus on differences between glucocorticoid-sensitive and glucocorticoid-refractory disease states.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329991 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329991 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1462339 ncbi.nlm.nih.gov/bioproject/PRJNA1462339 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · Heart 65% · Longitudinal study 65% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329991 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].local:method:longitudinal-study | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |