Data · dataset · 2024
Atlantic Puffin (Fratercula arctica) single-nucleotide polymorphism (SNP) datasets
Listed in UNB Libraries Dataverse Research Data Repository
Blood samples were collected from Atlantic Puffins breeding at five colonies in Atlantic Canada.
Description
DNA was extracted using a DNeasy Blood and Tissue DNA Kit from Qiagen. Triple digest genotype-by-sequencing (3D-GbS) library preparation was performed using three restriction enzymes (PstI/NsiI/MspI).
Samples were sequenced on one lane using 150 bp, paired-end sequencing with an Illumina NovaSeq 6000. Data were assembled with Stacks v.2.6.1, see publication for full methodological details. Filtered SNP datasets used in genetic analyses are included here.
Links
Where it is published
- Dataverse dataset page dataverse.lib.unb.ca/dataset.xhtml?persistentId=doi%3A10.25545%2FXWGRBP ↗
landing page · from dataverse lib unb ca
- DOI doi.org/10.25545/xwgrbp ↗
DOI / persistent id · from dataverse lib unb ca
Catalogue records · 1
- Dataverse API dataverse.lib.unb.ca/api/datasets/:persistentId/?persistentId=doi%3A10.25545%2FXWGR… ↗
metadata API · from dataverse lib unb ca
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| UNB Libraries Dataverse Research Data Repository | doi:10.25545/XWGRBP | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /subjects |
| concepts[field].local:field:social-science | mapping · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /subjects |
| concepts[modality].local:modality:sequencing | enrichment · dataverse lib unb ca | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | |
| description | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /description |
| publication_date | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | |
| title | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | /name |
| updated_date | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 | |
| version_label | source · dataverse lib unb ca | connector:dataverse_lib_unb_ca@1.0.0 |