Data · dataset · 2026
Digitalis purpurea genome sequence and annotation V2
Listed in bonndata
Here we present a high-quality genome sequence and annotation of Digitalis purpurea (commonly known as foxglove), a plant valued both for its ornamental flowers and for producing the cardiac drug digoxin.
Description
The study aims to uncover the genetic basis of flower color variation in this species. Using ONT long-read sequencing data, we assembled the genome sequence of a magenta-flowering D. purpurea individual.
We performed extensive gene prediction and functional annotation of protein-coding genes. Genes of the flavonoid biosynthesis were compared between magenta and white flowering individuals. Expression patterns were compared between different plant organs and between plants with different flower colors.
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Through these analyses, we identified a large insertion in the anthocyanidin synthase (ANS) that explains the differences between magenta and white flowers. This data publication contains the genome sequence with the corresponding annotation V2.
Links
Where it is published
- Dataverse dataset page bonndata.uni-bonn.de/dataset.xhtml?persistentId=doi%3A10.60507%2FFK2%2F4KUKXI ↗
landing page · from bonndata uni bonn de
- DOI doi.org/10.60507/fk2/4kukxi ↗
DOI / persistent id · from bonndata uni bonn de
Catalogue records · 1
- Dataverse API bonndata.uni-bonn.de/api/datasets/:persistentId/?persistentId=doi%3A10.60507%2FFK2%… ↗
metadata API · from bonndata uni bonn de
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health
- Inferred from text
- Evolutionary biology 70% · Heart 65% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| bonndata | doi:10.60507/FK2/4KUKXI | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[anatomy].local:anatomy:heart | enrichment · bonndata uni bonn de | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].anzsrc:group:3104 | enrichment · bonndata uni bonn de | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | /subjects |
| concepts[modality].local:modality:sequencing | enrichment · bonndata uni bonn de | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | |
| description | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | /description |
| publication_date | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | |
| title | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | /name |
| updated_date | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 | |
| version_label | source · bonndata uni bonn de | connector:bonndata_uni_bonn_de@1.0.0 |