Data · dataset · 2012
Dataset for Erratum of Finet et al. 2011
Listed in DataCite
Description
This fileset includes several datasets accompanying the erratum referring to Finet et al. 2011. 1) N-makers-filtered.tre.gz contains the bunch of trees independently obtained for each of the 77 ribosomal protein (RP) alignment using RAxML and a LG+gamma model (editable with figtree*). 2) indep_markers.tgz includes the correspondent 77 RP alignments employed to reconstruct corresponding tree in phylip format. 3) N0503+C.phy.gz is the concatenated alignement of 77 RPs for 77 taxa employed for phylogenetic reconstruction. 4) N0503+C.raxml_lg+gam.tre.gz is the ML tree reconstructed for this dataset using RAxML with LG+gam model 5) N0503+C.cat+gam.tre.gz is the bayesian tree reconstructed for this dataset using Phylobayes with CAT+gam model.
- all trees or tree sets have been formatted to be viewed with figtree (downloadable with tree.bio.ed.ac.uk/software/figtree/)
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Dataset_for_Erratum_of_Finet_et_al._2011/95890 ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.95890 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.95890 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.95890 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Computer and information sciences
- From keywords
- Evolutionary biology
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.95890 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |