Data · dataset · 2013
Draft genomes from uncultured Thiohalocapsa sp. PB-PSB1 and uncultured Desulfofustis sp. PB-SRB1 from the study "Microscale sulfur cycling in the pink berry consortia of the Sippewissett salt marsh"
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The pink berries are macroscopic, photosynthetic microbial aggregates composed primarily of two closely associated species: sulfide-oxidizing purple sulfur bacteria (uncultured Thiohalocapsa sp.
Description
PB-PSB1) of the family Chromatiaceae and sulfate reducing bacteria (uncultured Desulfofustis sp. PB-SRB1) from the Desulfobulbacaea.
This dataset consists of the near-complete draft genomes for these two bacterial species. Annotations provieded here were generated by RAST. These genomes were obtained by binning assembled metagenomic data associated with ncbi bioproject: PRJNA214436.
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Genomes annotation data presented here was generated by the RAST automated annotation pipeline with frame-shift correction (rast.nmpdr.org). Full description of the methods used to generate this data and analysis of these genomes has been provided in the publication "A sulfurous symbiosis: microscale sulfur cycling in the pink berry consortia of the Sippewissett salt marsh" (Wilbanks, et al. in preparation).
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Draft_genomes_from_uncultured_Thiohalocapsa_s… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.770903 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.770903 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.770903 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Computer and information sciences · Earth and related environmental sciences
- From keywords
- Ecology · Geochemistry · Microbiology
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.770903 | 14 d ago | JSON v1 |
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| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:earth-and-related-environmental-sciences | source · DataCite | connector:datacite@1.0.0 | |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
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| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
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