Omics · study · 2026
scRNA-seq of adipose tissue from insulinoma patients and healthy controls
Listed in NCBI GEO
We performed single-cell RNA sequencing of paired subcutaneous and visceral adipose tissue from patients with insulinoma and healthy controls to investigate insulin-dependent mechanisms of adipose-tissue cell differentiation in vivo.
Description
Insulinoma provides a unique clinical model of chronic endogenous hyperinsulinemia, enabling the assessment of cellular and transcriptional responses to sustained insulin exposure in human adipose tissue.
Stromal vascular fraction cells were profiled to characterize tissue-resident cell populations and to identify insulin-associated changes in cell-state composition, differentiation trajectories, and gene-expression programs. By comparing subcutaneous and visceral depots, we further examined whether hyperinsulinemia-associated mechanisms differ between anatomically and metabolically distinct adipose tissues. This study provides a single-cell resource for investigating depot-specific regulation of adipose tissue remodeling and may help clarify the role of insulin signaling in human adipose cell differentiation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE344nnn/GSE344277 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344277 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1515196 ncbi.nlm.nih.gov/bioproject/PRJNA1515196 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 68% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE344277 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (68%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |