Excel · study · 2026
Differentially expressed genes (DEGs) in HEK-293T cells treated with the culture supernatant of yeast-form Candida albicans
Listed in NCBI GEO
The yeast-form of Candida albicansis known to secrete bioactive metabolites that modulate host cellular responses.
Description
In this study, we investigated the transcriptional impact of yeast-form C. albicansculture supernatant on human embryonic kidney (HEK)-293T cells. HEK-293T cells were treated with the supernatant, followed by RNA sequencing (RNA-seq) to identify differentially expressed genes (DEGs).
Transcriptomic profiling revealed a distinct gene expression signature in treated cells compared to controls. Functional enrichment analysis of these DEGs highlighted significant modulation of pathways associated with cellular stress responses and signal transduction. These findings provide a comprehensive genomic landscape of the host cell response to soluble factors derived from the yeast-form C. albicans, offering insights into the molecular mechanisms underlying fungus-host cell interactions at the transcriptional level.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE335nnn/GSE335460 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335460 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1478589 ncbi.nlm.nih.gov/bioproject/PRJNA1478589 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE335460 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |