Omics · study · 2026
Placental TRPV2 supports trophoblast function and normal fetal development
Listed in NCBI GEO
This study investigates the role of the calcium-permeable ion channel TRPV2 in placental development, with a focus on trophoblast differentiation and syncytiotrophoblast lineage specification.
Description
Using a conditional knockout mouse model, we demonstrate that loss of Trpv2 leads to placental abnormalities characterized by impaired labyrinth organization and reduced vascularization. In situ hybridization reveal that Trpv2 is expressed in specific trophoblast subpopulations, including syncytiotrophoblast lineage cells.
To assess transcriptional consequences of Trpv2 loss at the tissue level, bulk RNA sequencing was performed on isolated placental labyrinth tissue from control and knockout embryos at mid- and late gestation stages. To complement the in vivo analysis, we generated Trpv2 knockout mouse trophoblast stem cells (mTSCs) using CRISPR/Cas9 and performed bulk RNA sequencing under stem and differentiation conditions. These experiments were designed to identify cell-autonomous transcriptional changes and to assess the role of TRPV2 in regulating trophoblast differentiation programs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE334nnn/GSE334003 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334003 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1473373 ncbi.nlm.nih.gov/bioproject/PRJNA1473373 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE334003 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |