Omics · study · 2026
The mRNA levels of Ly6G+ cells from the bone marrow of septic mice after IFN-gamma stimulation.
Listed in NCBI GEO
Currently, immunotherapy represents a promising therapeutic approach for patients with sepsis in the refractory immunosuppressive phase.
Description
The pro-inflammatory cytokine interferon-gamma (IFN-γ) has been investigated in both septic patients and murine sepsis models, yet no significant mortality reduction has been reported in clinical applications. We hypothesize that IFN-γ treatment may concurrently activate polymorphonuclear myeloid-derived suppressor cells (PMN-MDSCs), a population of immunosuppressive cells, during the immunocompromised phase of sepsis.
To investigate this mechanism, we stimulated bone marrow cells from CLP (cecal ligation and puncture) model mice in the immunosuppressive phase of sepsis with IFN-γ in vitro. Subsequently, we isolated PMN-MDSCs and performed RNA sequencing to analyze transcriptomic alterations at the gene expression level.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE297nnn/GSE297320 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297320 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1251048 ncbi.nlm.nih.gov/bioproject/PRJNA1251048 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE297320 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |