Omics · study · 2026
A simple cell culture assay for human prostatic branching morphogenesis spotlights Bone Morphogenetic Protein signaling as a therapeutic target in benign prostatic hyperplasia
Listed in NCBI GEO
Benign prostatic hyperplasia (BPH) leads to prostate enlargement and lower urinary tract symptoms that can resist treatment.
Description
A histologic hallmark of BPH is glandular epithelial hyperplasia with new ductal branching morphogenesis. The stromal inductive factors driving tissue morphogenesis may provide new therapeutic targets, but are incompletely known due in part to a paucity of cell culture model systems.
We thus sought to create a reliable cell culture assay for human prostatic branching morphogenesis. Various combinations of input cells, cell densities and cell culture medium were trialed. A robust solution comprised embedding BHPrE1 immortalized human prostatic epithelial cells in Matrigel, together with an inductive source of BPH stromal fibroblasts or their conditioned medium.
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Transcriptome sequencing (RNAseq) of the BPH stromal fibroblasts (BHPrS1 and BPHfib) and BHPrE1 spheroids was done to identify the spectrum of candidate stromal inductive factors and responding receptors.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE328nnn/GSE328122 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328122 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1453959 ncbi.nlm.nih.gov/bioproject/PRJNA1453959 ↗
project · from NCBI GEO
- PubMed 42391486 pubmed.ncbi.nlm.nih.gov/42391486 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE328122 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |