Excel · study · 2026
Bulk RNA-sequencing of TA in MBNL1/2 KD muscle
Listed in NCBI GEO
Myotonic dystrophy type 1 (DM1) is a multisystemic disorder caused by expanded CTG repeats in DMPK transcripts and consequent loss of MBNL protein function.
Description
Skeletal muscle in DM1 displays abundant centrally located nuclei despite limited immune-cell–associated fibre necrosis, complicating interpretation of the underlying mechanisms of muscle damage and remodelling. Here, we combine single-nucleus RNA sequencing of human DM1 muscle biopsies with adult-onset, myofibre-specific Mbnl knockdown mouse models to investigate muscle stem cell (MuSC) behaviour in this context.
We identify increased numbers of activated MuSCs and a distinct population of myonuclei exhibiting a transitional transcriptional state, including expression of MuSC-associated markers and elevated DMPK levels. In mice, myofibre-restricted MBNL knockdown induces myonuclear accretion in the absence of overt necrosis and promotes analogous transcriptionally distinct myonuclear states. MuSC lineage tracing and ablation demonstrate that MuSC fusion contributes to central nucleation.
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Together, these findings indicate that MuSC-mediated fusion drives myonuclear remodelling in DM1 muscle, giving rise to centrally located myonuclei with altered transcriptional states. Notably, MuSC ablation did not significantly alter key functional parameters, including myotonia and muscle force, indicating that MuSC-mediated fusion is not a major determinant of overt muscle dysfunction in this model.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE335nnn/GSE335961 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335961 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1480041 ncbi.nlm.nih.gov/bioproject/PRJNA1480041 ↗
project · from NCBI GEO
- PubMed 42693134 pubmed.ncbi.nlm.nih.gov/42693134 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE335961 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |