Data · dataset · 2025
Full-length 16S rRNA gene long-read sequencing from dried cervicovaginal fluid
Listed in Researchdata.se
This dataset refers to the 16S rRNA gene long-read sequencing data described in the article "Full-length multiplexed 16S rRNA gene sequencing works well in self-collected decade old cervicovaginal fluid on paper cards" (unpublished).
Description
DNA was extracted from two 3 mm punches of paper cards containing dried cervicovaginal fluids that had been stored for up to eleven years at room temperature. Full-length 16S rRNA gene amplicons (~1.5 kb) were generated using the Kinnex 16S protocol followed by long-read sequencing using the Pacific Biosciences (PacBio) Revio system.
The raw fastq files consist of de-multiplexed and circular consensus sequencing reads. A more detailed description of the methods can be found in the paper.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.28367732 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Life Sciences · Medicine & Health
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-28367732/0 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |