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Omics · study · 2026

Single cell RNA-seq of human synovium from patients with anterior cruciate ligament rupture

Listed in NCBI GEO

Single-cell RNA sequencing (scRNA-seq) was performed on human synovial tissues obtained from patients with anterior cruciate ligament rupture (ACLR) to characterize cellular programs associated with synovial tissue states.

Description

Osteoarthritis (OA) is a heterogeneous joint disease exhibiting substantial variability in synovial inflammation, vascularization, and fibrotic remodeling. In this study, synovial tissue samples from ACLR patients undergoing surgery were enzymatically dissociated and subjected to single-cell RNA sequencing.

Publicly available scRNA-seq datasets of OA synovium were used for comparison. These single-cell transcriptomic data were generated as part of a broader effort to investigate cellular heterogeneity in synovial tissue and its relationship to tissue microenvironments and disease pathology. The dataset provides a resource for comparative analysis of synovial cellular composition and may facilitate the identification of cell populations and signaling pathways associated with synovial remodeling and inflammation.

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From keywords
Life Sciences
Inferred from text
Disease 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32789115 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[disease].local:disease:diseaseenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title