Omics · study · 2026
Dysregulation of peripheral blood B-cells and NK-cells is associated with myocarditis in idiopathic inflammatory myopathies
Listed in NCBI GEO
Idiopathic inflammatory myopathies (IIM), or myositis, are a group of systemic autoimmune diseases leading to proximal muscle weakness.
Description
Myocarditis is estimated to affect up to 50% of IIM patients and is a major cause of adverse outcomes in these patients. Yet, we know very little about the underlying immunologic processes that are driving myocarditis in the context of IIM.
In this study we use single-cell RNA sequencing of peripheral blood mononuclear cells of 12 patients with myositis alone (n=4), myositis plus myocarditis(n=4) and healthy controls(n=4), in order to better understand the immunologic alterations characterizing this manifestation of the disease. We found the most notable changes in B cells and NK cells with myositis plus myocarditis patients B cells having gene expression signatures suggestive of increased DNA replication and repair, somatic hypermutation, and lymphocyte activation, but a smaller proportion of memory B cells, suggesting a greater activation of naive B cells in the periphery.
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NK cells on the other hand showed gene expression signatures suggestive of reduced proliferation, but increased effector functions such as leukocyte degranulation, myeloid cell activation, and tumor necrosis factor secretion, suggesting that NK cells in myocarditis plus myositis are more activated but less proliferative than in myositis alone. Together this data suggests that B cells and NK cells may be playing important roles in mediating myocarditis pathogenesis in the context of IIM, and may be important future therapeutic targets.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE310nnn/GSE310662 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310662 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1366908 ncbi.nlm.nih.gov/bioproject/PRJNA1366908 ↗
project · from NCBI GEO
- PubMed 42755331 pubmed.ncbi.nlm.nih.gov/42755331 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65% · Disease 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE310662 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |