Omics · study · 2026
Human Serum Extracellular Vesicle miRNA Profiling of the Response to Acute Aerobic Exercise in Major Depressive Disorder
Listed in NCBI GEO
Small RNA sequencing was performed on extracellular vesicles isolated from human serum collected at multiple time points surrounding an acute aerobic exercise intervention (baseline, midpoint, immediately post, and 75 minutes post-exercise).
Description
Serum was prepared by clotting and centrifugation and stored at −80 °C. Extracellular vesicles were enriched from filtered serum using the exoEasy Maxi kit, and total RNA was extracted using the miRNeasy Serum/Plasma kit.
Small RNA libraries were prepared using the Lexogen Small RNA-Seq Library Prep Kit with reduced adapter concentrations and 22 PCR cycles due to low RNA input. Library quality and concentration were assessed using Qubit and Bioanalyzer assays. Sequencing was performed on an Illumina NovaSeq 6000 platform using single-end 100-bp reads.
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The processed data file contains the small RNA count matrix for all samples.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE320nnn/GSE320360 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320360 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1427661 ncbi.nlm.nih.gov/bioproject/PRJNA1427661 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE320360 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |