Omics · study · 2026
Immune dysregulation in the prostates of C57BL/6Aire-/- mice mirrors that seen in BPH
Listed in NCBI GEO
BPH represents the most prevalent urologic condition affecting aging men and causes considerable morbidity.
Description
The pathology is multifaceted, characterized by both stromal and epithelial cell proliferation, tissue fibrosis, lower urinary tract symptoms, and concurrent inflammatory processes. To model human benign prostatic hyperplasia (BPH), we employed 10X Genomics single-cell RNA sequencing to investigate prostate inflammation in C57BL/6 Aire-/- mice.The Aire-deficient mouse model provides a chronic inflammatory environment with intact immune responses, differing only in impaired central immune tolerance.
The resulting datasets were subsequently compared against existing human BPH single-cell RNA sequencing data to validate the model's relevance.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE300nnn/GSE300554 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE300554 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1281170 ncbi.nlm.nih.gov/bioproject/PRJNA1281170 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE300554 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |