Data · study · 2026
Gene expression changes in commensal 3D full thickness skin models induced by different skin bacterial mixtures.
Listed in NCBI GEO
Our data indicates that a higher bacterial species diversity is associated with a biologically stable and non-pathogenic co-culture.
Description
We established a commensal human skin model to more accurately emulate healthy skin and facilitate future investigations of microbiome-mediated effects on host health. The system is based on a commercial human full-thickness skin model that can be stably colonized with a defined bacterial community.
This community comprises ten different bacterial species that encompass three main phyla, Bacillota, Actinomycetota, and Pseudomonadota, in ratios similar to those found on human skin (BAP). The suitability of BAP for skin colonization was evaluated against combinations of two or one phyla (BA, BP, AP, B, A, and P).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE283nnn/GSE283830 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283830 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1195850 ncbi.nlm.nih.gov/bioproject/PRJNA1195850 ↗
project · from NCBI GEO
- PubMed 42655067 pubmed.ncbi.nlm.nih.gov/42655067 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Evolutionary biology 70%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE283830 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3104 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |