Data · dataset · 2019
Genome assembly of the yellow drum (Nibea albiflora)
Listed in DataCite
We sequenced a gynogenetic yellow drum and assembled a near-complete genome.
Description
A total of 42.96 Gb of Illumina short-reads and 80.27 Gb of PacBio long-reads were generated and assembled into a 628.01 Mb genome with a contig N50 length of 4.42 Mb. Hi-C analysis resulted in the identification of 24 chromosomes with a scaffold N50 of 26.73 Mb.
The mtDNA was also assembled.
Links
Where it is published
- Repository landing page figshare.com/articles/Genome_assembly_of_the_yellow_drum_Nibea_albiflora_/1… ↗
landing page · from DataCite
- Repository landing page figshare.com/articles/Genome_assembly_of_the_yellow_drum_Nibea_albiflora_/1… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.11327981 ↗
DOI / persistent id · from DataCite
- DOI doi.org/10.6084/m9.figshare.11327981.v1 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 4
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.11327981.v1 ↗
metadata API · from DataCite
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.11327981 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.11327981.v1 ↗
catalogue entry · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.11327981 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Agriculture, forestry, and fisheries · Agriculture, forestry, and fisheries · Animal and dairy science · Animal and dairy science · Biological sciences · Biological sciences
- Inferred from text
- Genetics 72%
Provenance · 2 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.11327981 | 15 d ago | JSON v1 |
| DataCite | 10.6084/m9.figshare.11327981.v1 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · DataCite | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[field].fos:agriculture-forestry-and-fisheries | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:agriculture-forestry-and-fisheries | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:animal-and-dairy-science | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:animal-and-dairy-science | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |