Data · dataset · 2026
Genome assembly and annotation of Dendrobium tangerinum
Listed in ScienceDB
This dataset consists of the original sequencing and analysis data related to the chromosome-level genome assembly and annotation of Dendrobium tangerinum.
Description
This species is an endemic epiphytic orchid from New Guinea, belonging to Dendrobium sect. Spatulata, and has extremely high value for horticultural breeding and evolutionary research.
The dataset includes the raw data from PacBio HiFi long-read sequencing, Hi-C chromatin interaction sequencing, and transcriptome annotation sequencing. It also provides 19 chromosome-level genome sequence files and annotation files after assembly and mounting. The genome assembly size is 724.16 Mb, and the BUSCO completeness is 97.2%.
Read the rest (1 more)
This provides high-quality genomic resources for comparative genomics, evolutionary biology, secondary metabolism regulation, and molecular breeding research of the Dendrobium genus and orchids in the Orchidaceae family, and fills the gap in the research on the genome of the sect. Spatulata.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.29602 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Genetics 68% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.29602 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (68%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |