Data · dataset · 2018
Replication data for: A sweetpotato gene index established by de novo assembly of pyrosequencing and Sanger sequences and mining for gene-based microsatellite markers
Listed in International Potato Center
Here we present the de novo assembly of 454 sequencing reads from two normalized sweetpotato libraries, together with publically available (expressed sequence tag) ESTs, which resulted in a gene index for hexaploid sweetpotato.
Description
This gene index facilitates the access to sweetpotato gene sequences and has allowed for the design of gene-based microsatellite markers.
Links
Where it is published
- Dataverse dataset page data.cipotato.org/dataset.xhtml?persistentId=doi%3A10.21223%2FP3%2FCZV6P9 ↗
landing page · from data cipotato org
- DOI doi.org/10.21223/p3/czv6p9 ↗
DOI / persistent id · from data cipotato org
Catalogue records · 1
- Dataverse API data.cipotato.org/api/datasets/:persistentId/?persistentId=doi%3A10.21223%2FP3%2… ↗
metadata API · from data cipotato org
Topics
- Stated by source
- Agricultural Sciences
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| International Potato Center | doi:10.21223/P3/CZV6P9 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].dataverse_subject:agricultural-sciences | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · data cipotato org | connector:data_cipotato_org@1.0.0 | /subjects |
| concepts[modality].local:modality:sequencing | enrichment · data cipotato org | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| description | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /description |
| publication_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| title | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /name |
| updated_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| version_label | source · data cipotato org | connector:data_cipotato_org@1.0.0 |