Data · study · 2026
Transcriptome analysis of a hydrostatic pressure-derived rice lineage (HPM) compared with the wild-type cultivar JL307
Listed in NCBI GEO
We used microarrays to compare the transcriptomes of a hydrostatic pressure-derived rice mutant lineage (HPM; derived from seeds treated at 100 MPa for 15 min and maintained by self-pollination for nine generations) and the parental wild-type cultivar JL307 at the two-leaf stage.
Description
The HPM lineage exhibited reduced plant height, tiller number and seed-setting rate, and showed extensive transcriptomic changes including altered expression of stress-responsive transcription factor families.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE345nnn/GSE345727 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345727 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1521760 ncbi.nlm.nih.gov/bioproject/PRJNA1521760 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE345727 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |