Omics · study · 2026
Sequencing analysis of CD4 positive CAR T cells pre treated with dexamethasone
Listed in NCBI GEO
In this research, we conducted a preliminary comparison of the in vitro anti-tumor effectiveness and phenotype of CD4+ and CD8+ CAR T cells.
Description
Our findings indicate that following multiple rounds of tumor cell stimulation, CD4+ CAR T cells demonstrated robust proliferation capabilities with reduced apoptosis rates, while also maintaining their effector phenotype. To further optimize the functionality of CD4+ CAR T cells, we implemented a low-dose decitabine pretreatment strategy for CAR T cells (referred to as dCAR T) during the CAR T cell preparation process.
After three rounds of in vitro tumor cell stimulation, dCAR T cells exhibit sustained anti-tumor efficacy and proliferation capacity. Analysis of bulk RNA sequencing data validates the enhanced effector phenotype and proliferation potential of dCAR T cells relative to conventional CAR T cells. These findings indicate that pretreatment with decitabine may modulate the transcriptional profile of CAR T cells.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE268nnn/GSE268123 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268123 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1114714 ncbi.nlm.nih.gov/bioproject/PRJNA1114714 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE268123 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |