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Omics · study · 2026

The function and mechanism of aldh3b1 in diabetic retinopathy

Listed in NCBI GEO

Sphingosine-1-phosphate (S1P), a crucial sphingolipid mediator, plays a pivotal role in the pathogenesis of diabetic retinopathy (DR) by influencing angiogenesis, inflammation, photoreceptor apoptosis, neurodegeneration, and fibrosis through interaction with its five specific receptors (S1PRs).

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These receptors have been recognized as promising targets for therapeutic intervention in various diseases and several S1PR-targeted drugs are already in clinical use or trials.

Despite extensive research into the role of S1P, the impact of its primary metabolic product, 2-hexadecenal (2-HD), remains unexplored. Recent studies have suggested ALDH3B1 as an enzyme in the detoxification of 2-HD. In this study, we established a CRISPR-mediated aldh3b1 knockout zebrafish to examine the in vivo effects of 2-HD accumulation.

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The absence of aldh3b1 led to elevated 2-HD levels, causing abnormal retinal vasculature in larval and adult zebrafish. Using transcriptomic and metabolomic analyses, we discovered that 2-HD accumulation and aldh3b1 deficiency triggered iron dysregulation and subsequent ferroptosis in both larval and adult zebrafish. Further examination revealed that 2-HD modulates ferroptosis by directly interacting with S1PR5.

This finding is supported by integrative analyses of single-cell RNA sequencing and RNA sequencing from human retinal DR samples , highlighting the therapeutic potential of targeting S1PR5. In summary, our findings not only elucidate a novel pathway involving 2-HD detoxification and its critical role in the retinal vasculature, but also propose targeting S1PR5 as an innovative therapeutic strategy in the treatment of DR.

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Life Sciences
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RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE26437715 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:7955source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title