Text · study · 2026
Gene expression profiling of HSC-3 oral squamous cell carcinoma cells co-cultured with necrotic cells
Listed in NCBI GEO
Oral squamous cell carcinoma (OSCC) cells are exposed to necrotic cell–derived factors within the tumor microenvironment.
Description
This dataset describes gene expression profiling of the human OSCC cell line HSC-3 following indirect co-culture with necrotic cells for 16 hours using cell culture inserts with 1 µm pores (NC/ID condition), in comparison with monoculture controls. Microarray analysis was performed to characterize transcriptional responses of HSC-3 cells to soluble factors released from necrotic cells.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE318nnn/GSE318625 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318625 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1419594 ncbi.nlm.nih.gov/bioproject/PRJNA1419594 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE318625 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |