Data · dataset · 2026
Code from: A distinct antigen presentation pathway drive potent T-cell immunity in lipid nanoparticle-based mRNA vaccines
Listed in DataCite
In the paper by Muro et al (Science Advances 2026), to investigate whether mRNA-LNP affects the TCR repertoire of the induced CD8 T cells, we performed bulk TCR sequencing on the TCRα chains in retrogenic mice expressing a rearranged TCRβ chain.
Description
Retrogenic mice were immunized with OVA mRNA-LNP or OVA protein + poly I/C, and SIINFEKL/Kb tetramer-positive CD8 T cells were analyzed on day 14. TCR sequencing analysis showed that the number of TCR clonotypes was markedly reduced in SIINFEKL/Kb tetramer-positive CD8 T cells compared to total CD8 T cells before immunization.
Principal component analysis revealed a marked similarity in the composition of OVA peptide-reactive TCRs between mice immunized with OVA mRNA-LNP and those receiving OVA protein + poly I/C. These results showed similar TCR repertoires induced by OVA mRNA-LNP and OVA + poly I/C, suggesting that the robust expansion of CD8 T cells by mRNA-LNP is primarily due to differences that are quantitative rather than qualitative compared to antigen protein and conventional adjuvants.
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The sequencing data have been deposited in the DDBJ Sequence Read Archive under BioProject accession number PRJDB40453.
Links
Where it is published
- Repository landing page datadryad.org/dataset/doi:10.5061/dryad.h44j0zq25 ↗
landing page · from DataCite
- DOI doi.org/10.5061/dryad.h44j0zq25 ↗
DOI / persistent id · from DataCite
Documentation and papers
- Creative Commons Zero v1.0 Universal creativecommons.org/publicdomain/zero/1.0/legalcode ↗
license · from DataCite
- IsCitedBy 10.1126/sciadv.aec7827 doi.org/10.1126/sciadv.aec7827 ↗
publication · from DataCite
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.5061/dryad.h44j0zq25 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.5061/dryad.h44j0zq25 ↗
catalogue entry · from DataCite
Topics
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.5061/dryad.h44j0zq25 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| version_label | source · DataCite | connector:datacite@1.0.0 |