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Data · dataset · 2026

Code from: A distinct antigen presentation pathway drive potent T-cell immunity in lipid nanoparticle-based mRNA vaccines

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In the paper by Muro et al (Science Advances 2026), to investigate whether mRNA-LNP affects the TCR repertoire of the induced CD8 T cells, we performed bulk TCR sequencing on the TCRα chains in retrogenic mice expressing a rearranged TCRβ chain.

Description

Retrogenic mice were immunized with OVA mRNA-LNP or OVA protein + poly I/C, and SIINFEKL/Kb tetramer-positive CD8 T cells were analyzed on day 14. TCR sequencing analysis showed that the number of TCR clonotypes was markedly reduced in SIINFEKL/Kb tetramer-positive CD8 T cells compared to total CD8 T cells before immunization.

Principal component analysis revealed a marked similarity in the composition of OVA peptide-reactive TCRs between mice immunized with OVA mRNA-LNP and those receiving OVA protein + poly I/C. These results showed similar TCR repertoires induced by OVA mRNA-LNP and OVA + poly I/C, suggesting that the robust expansion of CD8 T cells by mRNA-LNP is primarily due to differences that are quantitative rather than qualitative compared to antigen protein and conventional adjuvants.

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The sequencing data have been deposited in the DDBJ Sequence Read Archive under BioProject accession number PRJDB40453.

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Sequencing 75%
Provenance · 1 source records, 9 field assertions
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DataCite10.5061/dryad.h44j0zq2515 d agoJSON v1
FieldAssertionExtractorEvidence
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