Omics · study · 2026
Mapping chromatin landscape regulated by RBBP4/p300 complex in glioblastoma [ChIP-seq]
Listed in NCBI GEO
We report the application of ChIPseq to map the chromatin landscape associated with RBBP4/p300 complex in glioblastoma.
Description
For this, we performed RBBP4 and p300 specific ChIP followed by sequencing in GBM44 and 154 and identified regions co-occupied by RBBP4 and p300. We also used H3K9ac and H3K27Ac to map the potential promoters and/or enhancers controlled by histone acetylation mediated through RBBP4/p300 comolex.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE196nnn/GSE196381 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE196381 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA804548 ncbi.nlm.nih.gov/bioproject/PRJNA804548 ↗
project · from NCBI GEO
- PubMed 42291750 pubmed.ncbi.nlm.nih.gov/42291750 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE196381 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |